Added complement test

.github/filters.yml

@@ -147,7 +147,7 @@ ucsc_bedgraphtobigwig:
 
 bedtools_complement:
   - software/bedtools/complement/**
-  - tests/software/bedtools/**
+  - tests/software/bedtools/complement**
 
 bedtools_genomecov:
   - software/bedtools/genomecov/**

tests/software/bedtools/complement/main.nf

@@ -0,0 +1,16 @@
+#!/usr/bin/env nextflow
+
+nextflow.enable.dsl = 2
+
+include { BEDTOOLS_COMPLEMENT } from '../../../../software/bedtools/complement/main.nf' addParams( options: [:] )
+
+
+workflow test_bedtools_complement {
+    def input = []
+    input = [ [ id:'test'],
+              file("${launchDir}/tests/data/bed/A.bed", checkIfExists: true),
+              file("${launchDir}/tests/data/bed/genome.sizes", checkIfExists: true) ] //metamap
+
+    BEDTOOLS_COMPLEMENT( input )
+}
+

tests/software/bedtools/complement/test.yml

@@ -0,0 +1,10 @@
+- name: bedtools complement
+  command: nextflow run ./tests/software/bedtools/complement -entry test_bedtools_complement -c tests/config/nextflow.config
+  tags:
+    - bedtools
+    - bedtools_complement
+
+    files:
+    - path: output/bedtools/test.complement.bed
+      md5sum: 55a43973abb1a08ac57290ff44f6c502
+      should_exist: true