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add stub

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This commit is contained in:
Matthias De Smet 2022-05-24 12:16:03 +02:00
parent 01fb8851c3
commit b5850fd471
1 changed files with 18 additions and 0 deletions
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18
modules/mosdepth/main.nf
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@ -46,4 +46,22 @@ process MOSDEPTH {
mosdepth: \$(mosdepth --version 2>&1 | sed 's/^.*mosdepth //; s/ .*\$//') mosdepth: \$(mosdepth --version 2>&1 | sed 's/^.*mosdepth //; s/ .*\$//')
END_VERSIONS END_VERSIONS
""" """
stub:
def prefix = task.ext.prefix ?: "${meta.id}"
"""
touch ${prefix}.global.dist.txt
touch ${prefix}.region.dist.txt
touch ${prefix}.summary.txt
touch ${prefix}.per-base.d4
touch ${prefix}.per-base.bed.gz
touch ${prefix}.per-base.bed.gz.csi
touch ${prefix}.regions.bed.gz
touch ${prefix}.regions.bed.gz.csi
cat <<-END_VERSIONS > versions.yml
"${task.process}":
mosdepth: \$(mosdepth --version 2>&1 | sed 's/^.*mosdepth //; s/ .*\$//')
END_VERSIONS
"""
} }