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Add compressed bed files (#864)

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* add cram files to config

* Update tests/config/test_data.config

* Add compressed bed file

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
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FriederikeHanssen 2021-10-15 11:10:53 +02:00 committed by GitHub
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tests/config/test_data.config
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@ -104,6 +104,8 @@ params {
genome_gtf = "${test_data_dir}/genomics/homo_sapiens/genome/genome.gtf" genome_gtf = "${test_data_dir}/genomics/homo_sapiens/genome/genome.gtf"
genome_sizes = "${test_data_dir}/genomics/homo_sapiens/genome/genome.sizes" genome_sizes = "${test_data_dir}/genomics/homo_sapiens/genome/genome.sizes"
genome_bed = "${test_data_dir}/genomics/homo_sapiens/genome/genome.bed" genome_bed = "${test_data_dir}/genomics/homo_sapiens/genome/genome.bed"
genome_bed_gz = "${test_data_dir}/genomics/homo_sapiens/genome/genome.bed.gz"
genome_bed_gz_tbi = "${test_data_dir}/genomics/homo_sapiens/genome/genome.bed.gz.tbi"
transcriptome_fasta = "${test_data_dir}/genomics/homo_sapiens/genome/transcriptome.fasta" transcriptome_fasta = "${test_data_dir}/genomics/homo_sapiens/genome/transcriptome.fasta"
genome2_fasta = "${test_data_dir}/genomics/homo_sapiens/genome/genome2.fasta" genome2_fasta = "${test_data_dir}/genomics/homo_sapiens/genome/genome2.fasta"