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Update modules/manta/convertinversion/main.nf

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Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>
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FriederikeHanssen 2022-06-13 09:26:29 +02:00 committed by GitHub
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commit b8ff8e32e3
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modules/manta/convertinversion/main.nf
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@ -2,7 +2,7 @@ process MANTA_CONVERTINVERSION {
tag "$meta.id" tag "$meta.id"
label 'process_low' label 'process_low'
conda (params.enable_conda ? "bioconda::samtools=1.15.1 bioconda::manta=1.6.0" : null) conda (params.enable_conda ? "bioconda::manta=1.6.0 bioconda::samtools=1.15.1" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/mulled-v2-40295ae41112676b05b649e513fe7000675e9b84:0b4be2c719f99f44df34be7b447b287bb7f86e01-0': 'https://depot.galaxyproject.org/singularity/mulled-v2-40295ae41112676b05b649e513fe7000675e9b84:0b4be2c719f99f44df34be7b447b287bb7f86e01-0':
'quay.io/biocontainers/mulled-v2-40295ae41112676b05b649e513fe7000675e9b84:0b4be2c719f99f44df34be7b447b287bb7f86e01-0' }" 'quay.io/biocontainers/mulled-v2-40295ae41112676b05b649e513fe7000675e9b84:0b4be2c719f99f44df34be7b447b287bb7f86e01-0' }"