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revert markduplciatespark changes

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Rike 2022-05-16 09:54:40 +02:00
parent 8b4d021189
commit ba14355891
1 changed files with 0 additions and 2 deletions
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modules/gatk4/markduplicatesspark/main.nf
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@ -34,8 +34,6 @@ process GATK4_MARKDUPLICATES_SPARK {
""" """
export SPARK_USER=spark3 export SPARK_USER=spark3
gatk --java-options "-Xmx${avail_mem}g" MarkDuplicatesSpark \\ gatk --java-options "-Xmx${avail_mem}g" MarkDuplicatesSpark \\
$input_list \\ $input_list \\
--output $prefix \\ --output $prefix \\