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fix software definitions

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This commit is contained in:
Matthias De Smet 2022-05-06 11:07:05 +02:00
parent 1c7205d683
commit bd1b80f36e
2 changed files with 6 additions and 6 deletions
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6
modules/md5sum/main.nf
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@ -2,10 +2,10 @@ process MD5SUM {
tag "$meta.id" tag "$meta.id"
label 'process_low' label 'process_low'
conda (params.enable_conda ? "conda-forge::coreutils=8.25" : null) conda (params.enable_conda ? "conda-forge::coreutils=9.1" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/coreutils:8.31--h14c3975_0' : 'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
'quay.io/biocontainers/coreutils:8.31--h14c3975_0' }" 'ubuntu:20.04' }"
input: input:
tuple val(meta), path(file) tuple val(meta), path(file)

6
modules/shasum/main.nf
View file

@ -2,10 +2,10 @@ process SHASUM {
tag "$meta.id" tag "$meta.id"
label 'process_low' label 'process_low'
conda (params.enable_conda ? "conda-forge::coreutils=8.25" : null) conda (params.enable_conda ? "conda-forge::coreutils=9.1" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/coreutils:8.31--h14c3975_0' : 'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
'quay.io/biocontainers/coreutils:8.31--h14c3975_0' }" 'ubuntu:20.04' }"
input: input:
tuple val(meta), path(file) tuple val(meta), path(file)