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fix args in nextflow.config

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Matthias De Smet 2022-04-29 10:13:22 +02:00
parent 0e01d703ea
commit bda132191d
1 changed files with 1 additions and 1 deletions
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tests/modules/picard/markduplicates/nextflow.config
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@ -3,7 +3,7 @@ process {
publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" }
withName: PICARD_MARKDUPLICATES_UNSORTED {
ext.args = 'ASSUME_SORT_ORDER=queryname'
ext.args = '--ASSUME_SORT_ORDER queryname'
}
}