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This commit is contained in:
Matthias De Smet 2022-06-08 14:42:58 +02:00
parent e5f8924fab
commit c005a5e007
1 changed files with 5 additions and 4 deletions
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tests/modules/multiqc/main.nf
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@ -7,16 +7,17 @@ include { FASTQC as FASTQC2 } from '../../../modules/fastqc/main.nf'
include { MULTIQC } from '../../../modules/multiqc/main.nf' include { MULTIQC } from '../../../modules/multiqc/main.nf'
workflow test_multiqc { workflow test_multiqc {
input = [ [ id: 'test', single_end: false ], input = [
[ file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true)] [ id: 'test', single_end: false ],
] [ file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true)]
]
FASTQC ( input ) FASTQC ( input )
MULTIQC ( FASTQC.out.zip.collect { it[1] }, [[],[]] ) MULTIQC ( FASTQC.out.zip.collect { it[1] }, [[],[]] )
} }
workflow test_multiqc_fn_collision { workflow test_multiqc_fn_collision {
fqc_input = [ fqc_input = [
[ id: 'test', single_end: false ], [ id: 'test', single_end: false ],
[ file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true)] [ file(params.test_data['sarscov2']['illumina']['test_1_fastq_gz'], checkIfExists: true)]
] ]