diff --git a/software/bcftools/merge/main.nf b/software/bcftools/merge/main.nf index e345c475..3e3238cf 100644 --- a/software/bcftools/merge/main.nf +++ b/software/bcftools/merge/main.nf @@ -28,7 +28,7 @@ process BCFTOOLS_MERGE { def software = getSoftwareName(task.process) prefix = options.suffix ? "${meta.id}${options.suffix}" : "${meta.id}" """ - bcftools merge -Oz\\ + bcftools merge -Oz \\ --output ${prefix}.vcf.gz \\ $options.args \\ *.vcf.gz