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Make input tuple
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parent
2e16c90fce
commit
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2 changed files with 3 additions and 4 deletions
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@ -8,8 +8,7 @@ process VSEARCH_USEARCHGLOBAL {
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'quay.io/biocontainers/vsearch:2.21.1--h95f258a_0' }"
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input:
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val(meta)
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path(queryfasta)
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tuple val(meta), path(queryfasta)
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path db
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val idcutoff
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val outoption
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@ -11,7 +11,7 @@ workflow test_vsearch_usearchglobal {
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idcutoff = 0.985
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outoption = "xcfert" // Nonsense text to check default case.
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columns = ""
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VSEARCH_USEARCHGLOBAL ( [id:'test'], query, db, idcutoff, outoption, columns )
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VSEARCH_USEARCHGLOBAL ( [[id:'test'], query], db, idcutoff, outoption, columns )
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}
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workflow test_vsearch_usearchglobal_userout {
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@ -21,5 +21,5 @@ workflow test_vsearch_usearchglobal_userout {
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idcutoff = 0.985
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outoption = "userout"
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columns = "query+target+id"
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VSEARCH_USEARCHGLOBAL ( [id:'test'], query, db, idcutoff, outoption, columns )
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VSEARCH_USEARCHGLOBAL ( [[id:'test'], query], db, idcutoff, outoption, columns )
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}
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