diff --git a/tools/fastqc/test/main.nf b/tools/fastqc/test/main.nf index f24a81da..c349bbe8 100644 --- a/tools/fastqc/test/main.nf +++ b/tools/fastqc/test/main.nf @@ -12,7 +12,7 @@ readPaths = [ ] Channel .from(readPaths) - .map { row -> [ row[0], [row[1][0]]] } + .map { row -> [ row[0], [ file(row[1][0]) ] ] } .set { ch_read_files } // Run the workflow