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rename aligned to alignment
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2 changed files with 2 additions and 2 deletions
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@ -13,7 +13,7 @@ process SAMTOOLS_CONVERT {
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path fai
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output:
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tuple val(meta), path("*.{cram,bam}"), path("*.{crai,bai}") , emit: aligned_index
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tuple val(meta), path("*.{cram,bam}"), path("*.{crai,bai}") , emit: alignment_index
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path "versions.yml" , emit: versions
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when:
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@ -39,7 +39,7 @@ output:
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description: |
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Groovy Map containing sample information
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e.g. [ id:'test', single_end:false ]
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- aligned_index:
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- alignment_index:
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type: file
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description: filtered/converted BAM/CRAM file + index
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pattern: "*{.bam/cram,.bai/crai}"
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