millironx/nf-core_modules
1
0
Fork 0
mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-13 05:13:09 +00:00
Code Issues Releases Packages Activity

rename aligned to alignment

Browse source
This commit is contained in:
Rike 2022-05-09 16:07:49 +02:00
parent 5bd456e5e8
commit da79396f06
2 changed files with 2 additions and 2 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

2
modules/samtools/convert/main.nf
View file

@ -13,7 +13,7 @@ process SAMTOOLS_CONVERT {
path fai path fai
output: output:
tuple val(meta), path("*.{cram,bam}"), path("*.{crai,bai}") , emit: aligned_index tuple val(meta), path("*.{cram,bam}"), path("*.{crai,bai}") , emit: alignment_index
path "versions.yml" , emit: versions path "versions.yml" , emit: versions
when: when:

2
modules/samtools/convert/meta.yml
View file

@ -39,7 +39,7 @@ output:
description: | description: |
Groovy Map containing sample information Groovy Map containing sample information
e.g. [ id:'test', single_end:false ] e.g. [ id:'test', single_end:false ]
- aligned_index: - alignment_index:
type: file type: file
description: filtered/converted BAM/CRAM file + index description: filtered/converted BAM/CRAM file + index
pattern: "*{.bam/cram,.bai/crai}" pattern: "*{.bam/cram,.bai/crai}"