diff --git a/modules/qualimap/rnaseq/main.nf b/modules/qualimap/rnaseq/main.nf index d1ed1021..fa32a6a7 100644 --- a/modules/qualimap/rnaseq/main.nf +++ b/modules/qualimap/rnaseq/main.nf @@ -54,7 +54,7 @@ process QUALIMAP_RNASEQ { cat <<-END_VERSIONS > versions.yml ${getProcessName(task.process)}: - ${getSoftwareName(task.process)}: \$(qualimap 2>&1 | sed 's/^.*QualiMap v.//; s/Built.*\$//') + ${getSoftwareName(task.process)}: \$(echo \$(qualimap 2>&1) | sed 's/^.*QualiMap v.//; s/Built.*\$//') END_VERSIONS """ }