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Update tests/software/ivar/variants/main.nf

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Harshil Patel 2021-02-16 22:58:38 +00:00 committed by GitHub
parent 23987bdad0
commit de90d371dc
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tests/software/ivar/variants/main.nf
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@ -4,6 +4,8 @@ nextflow.enable.dsl = 2
include { IVAR_VARIANTS } from '../../../../software/ivar/variants/main.nf' addParams([:]) include { IVAR_VARIANTS } from '../../../../software/ivar/variants/main.nf' addParams([:])
params.gff = false
workflow test_ivar_variants_no_gff_no_mpileup { workflow test_ivar_variants_no_gff_no_mpileup {
def ref = file("${launchDir}/tests/data/fasta/sarscov2/MN908947.3.fa", checkIfExists: true) def ref = file("${launchDir}/tests/data/fasta/sarscov2/MN908947.3.fa", checkIfExists: true)
def dummy = file("${launchDir}/tests/data/dummy/dummy_file.txt", checkIfExists: true) def dummy = file("${launchDir}/tests/data/dummy/dummy_file.txt", checkIfExists: true)