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Removed some whitespaces

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This commit is contained in:
Nicolas Vannieuwkerke 2022-05-06 16:21:32 +02:00
parent 8c857dee3a
commit e271410017
1 changed files with 2 additions and 2 deletions
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4
modules/rtgtools/vcfeval/main.nf
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@ -24,11 +24,11 @@ process RTGTOOLS_VCFEVAL {
def regions = bed ? "--bed-regions=$bed" : "" def regions = bed ? "--bed-regions=$bed" : ""
def truth_index = truth_vcf_tbi ? "" : "rtg index $truth_vcf" def truth_index = truth_vcf_tbi ? "" : "rtg index $truth_vcf"
def query_index = query_vcf_tbi ? "" : "rtg index $query_vcf" def query_index = query_vcf_tbi ? "" : "rtg index $query_vcf"
sdf_basename = sdf.getBaseName().replace(".tar","") sdf_basename = sdf.getBaseName().replace(".tar","")
tar_decomp = "" tar_decomp = ""
if((sdf =~ /.tar.gz\b/).find() == true) { if((sdf =~ /.tar.gz\b/).find() == true) {
tar_decomp = "tar -xzf $sdf" tar_decomp = "tar -xzf $sdf"
} }
""" """