From e499abe572bc7c1322dfa66b767b0e65fe8c62ca Mon Sep 17 00:00:00 2001
From: Alexander Peltzer <apeltzer@users.noreply.github.com>
Date: Fri, 10 Jun 2022 10:53:48 +0200
Subject: [PATCH] Update main.nf

---
 modules/cellranger/mkgtf/main.nf | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/modules/cellranger/mkgtf/main.nf b/modules/cellranger/mkgtf/main.nf
index 9dc2fe1a..a115706d 100644
--- a/modules/cellranger/mkgtf/main.nf
+++ b/modules/cellranger/mkgtf/main.nf
@@ -5,7 +5,7 @@ process CELLRANGER_MKGTF {
     if (params.enable_conda) {
         exit 1, "Conda environments cannot be used when using the Cell Ranger tool. Please use docker or singularity containers."
     }
-    container "nfcore/cellranger:6.1.2"
+    container "nfcore/cellranger:7.0.0"
 
     input:
     path gtf