millironx/nf-core_modules
1
0
Fork 0
mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-11-10 20:23:10 +00:00
Code Issues Releases Packages Activity

Update dsh-bio version to 2.0

Browse source
This commit is contained in:
Michael L Heuer 2021-01-22 12:12:56 -06:00
parent 23f9284aae
commit e6547d5b16
2 changed files with 6 additions and 6 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

6
software/dsh/filterbed/main.nf
View file

@ -11,12 +11,12 @@ process DSH_FILTERBED {
mode: params.publish_dir_mode, mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) } saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }
conda (params.enable_conda ? "bioconda::dsh-bio=1.4" : null) conda (params.enable_conda ? "bioconda::dsh-bio=2.0" : null)
if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) { if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
container "https://depot.galaxyproject.org/singularity/dsh-bio:1.4--0" container "https://depot.galaxyproject.org/singularity/dsh-bio:2.0--0"
} else { } else {
container "quay.io/biocontainers/dsh-bio:1.4--0" container "quay.io/biocontainers/dsh-bio:2.0--0"
} }
input: input:

6
software/dsh/splitbed/main.nf
View file

@ -11,12 +11,12 @@ process DSH_SPLITBED {
mode: params.publish_dir_mode, mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) } saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }
conda (params.enable_conda ? "bioconda::dsh-bio=1.4" : null) conda (params.enable_conda ? "bioconda::dsh-bio=2.0" : null)
if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) { if (workflow.containerEngine == 'singularity' && !params.singularity_pull_docker_container) {
container "https://depot.galaxyproject.org/singularity/dsh-bio:1.4--0" container "https://depot.galaxyproject.org/singularity/dsh-bio:2.0--0"
} else { } else {
container "quay.io/biocontainers/dsh-bio:1.4--0" container "quay.io/biocontainers/dsh-bio:2.0--0"
} }
input: input: