From e7f15feccf3775b1a53b8e76590c76a224261d40 Mon Sep 17 00:00:00 2001 From: JoseEspinosa Date: Tue, 2 Feb 2021 11:00:02 +0100 Subject: [PATCH] Adding `--no-version` to bcftools_isec for tests md5 check --- tests/software/bcftools/main.nf | 2 +- tests/software/bcftools/test.yml | 14 +++++++------- 2 files changed, 8 insertions(+), 8 deletions(-) diff --git a/tests/software/bcftools/main.nf b/tests/software/bcftools/main.nf index d22a9a4a..b4397f65 100644 --- a/tests/software/bcftools/main.nf +++ b/tests/software/bcftools/main.nf @@ -8,7 +8,7 @@ include { BCFTOOLS_STATS } from '../../../software/bcftools/stats/main.nf' addPa include { BCFTOOLS_BGZIP } from '../../../software/bcftools/bgzip/main.nf' addParams( options: [:] ) include { BCFTOOLS_TABIX } from '../../../software/bcftools/tabix/main.nf' addParams( options: [:] ) include { BCFTOOLS_CONSENSUS } from '../../../software/bcftools/consensus/main.nf' addParams( options: [:] ) -include { BCFTOOLS_ISEC } from '../../../software/bcftools/isec/main.nf' addParams( options: ['args': '--nfiles +2 --output-type z'] ) +include { BCFTOOLS_ISEC } from '../../../software/bcftools/isec/main.nf' addParams( options: ['args': '--nfiles +2 --output-type z --no-version'] ) include { BCFTOOLS_BGZIP as BCFTOOLS_BGZIP2 } from '../../../software/bcftools/bgzip/main.nf' addParams( options: [:] ) include { BCFTOOLS_TABIX as BCFTOOLS_TABIX2 } from '../../../software/bcftools/tabix/main.nf' addParams( options: [:] ) include { BCFTOOLS_BGZIP as BCFTOOLS_BGZIP3 } from '../../../software/bcftools/bgzip/main.nf' addParams( options: [:] ) diff --git a/tests/software/bcftools/test.yml b/tests/software/bcftools/test.yml index 31f9593c..ddb29817 100644 --- a/tests/software/bcftools/test.yml +++ b/tests/software/bcftools/test.yml @@ -64,18 +64,18 @@ - path: output/bcftools/test3.vcf.gz md5sum: eb75ae1f08a1884f8edc59ed423471a2 - path: output/bcftools/test/0000.vcf.gz - md5sum: 20bd741594f456c48e1928f07f0be342 + md5sum: 4e84e3b6903fa44e8bd1acdeff9b265d - path: output/bcftools/test/0000.vcf.gz.tbi - md5sum: d4357a62c60df6abcb5cc806b4681dff + md5sum: 8484b151ef902e25e54f7713d46ed90e - path: output/bcftools/test/0001.vcf.gz - md5sum: 20bd741594f456c48e1928f07f0be342 + md5sum: 4e84e3b6903fa44e8bd1acdeff9b265d - path: output/bcftools/test/0001.vcf.gz.tbi - md5sum: d4357a62c60df6abcb5cc806b4681dff + md5sum: 8484b151ef902e25e54f7713d46ed90e - path: output/bcftools/test/0002.vcf.gz - md5sum: 20bd741594f456c48e1928f07f0be342 + md5sum: 4e84e3b6903fa44e8bd1acdeff9b265d - path: output/bcftools/test/0002.vcf.gz.tbi - md5sum: d4357a62c60df6abcb5cc806b4681dff + md5sum: 8484b151ef902e25e54f7713d46ed90e - path: md5 output/bcftools/test/README.txt - md5sum: 9a3a041e63a18e0ad41abab96e2c5f73 + md5sum: 306fcb71aafe414046a34bedd4d14304 - path: md5 output/bcftools/test/sites.txt md5sum: 01bb949ed7825ecf692bf0640e363647