Deepvariant - Update main.nf (#2110)

Update main.nf simplify deepvariant container call
2 years ago · eb15df8036
parent daab0a77dd
commit eb15df8036
1 changed files with 1 additions and 3 deletions
--- a/modules/deepvariant/main.nf
+++ b/modules/deepvariant/main.nf
@ -7,9 +7,7 @@ process DEEPVARIANT {
        exit 1, "Conda environments cannot be used when using the DeepVariant tool. Please use docker or singularity containers."
    }

-    container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
-        'google/deepvariant:1.3.0' :
-        'google/deepvariant:1.3.0' }"
+    container 'google/deepvariant:1.3.0'

    input:
    tuple val(meta), path(input), path(index), path(intervals)