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Add label to bcftools processes

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JoseEspinosa 2021-02-24 09:47:54 +01:00
parent 823a631afc
commit ec674bb127
5 changed files with 5 additions and 0 deletions
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1
software/bcftools/consensus/main.nf
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@ -6,6 +6,7 @@ def options = initOptions(params.options)
process BCFTOOLS_CONSENSUS { process BCFTOOLS_CONSENSUS {
tag "$meta.id" tag "$meta.id"
label 'process_medium'
publishDir "${params.outdir}", publishDir "${params.outdir}",
mode: params.publish_dir_mode, mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) } saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }

1
software/bcftools/filter/main.nf
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@ -6,6 +6,7 @@ def options = initOptions(params.options)
process BCFTOOLS_FILTER { process BCFTOOLS_FILTER {
tag "$meta.id" tag "$meta.id"
label 'process_medium'
publishDir "${params.outdir}", publishDir "${params.outdir}",
mode: params.publish_dir_mode, mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) } saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }

1
software/bcftools/isec/main.nf
View file

@ -6,6 +6,7 @@ def options = initOptions(params.options)
process BCFTOOLS_ISEC { process BCFTOOLS_ISEC {
tag "$meta.id" tag "$meta.id"
label 'process_medium'
publishDir "${params.outdir}", publishDir "${params.outdir}",
mode: params.publish_dir_mode, mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) } saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }

1
software/bcftools/merge/main.nf
View file

@ -6,6 +6,7 @@ def options = initOptions(params.options)
process BCFTOOLS_MERGE { process BCFTOOLS_MERGE {
tag "$meta.id" tag "$meta.id"
label 'process_medium'
publishDir "${params.outdir}", publishDir "${params.outdir}",
mode: params.publish_dir_mode, mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) } saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }

1
software/bcftools/stats/main.nf
View file

@ -6,6 +6,7 @@ def options = initOptions(params.options)
process BCFTOOLS_STATS { process BCFTOOLS_STATS {
tag "$meta.id" tag "$meta.id"
label 'process_medium'
publishDir "${params.outdir}", publishDir "${params.outdir}",
mode: params.publish_dir_mode, mode: params.publish_dir_mode,
saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) } saveAs: { filename -> saveFiles(filename:filename, options:params.options, publish_dir:getSoftwareName(task.process), publish_id:meta.id) }