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Updated test.mainnf file.

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Added the necessary chrom sizes input and changed test file to directory (as specified in nfcore).
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sruthipsuresh 2020-10-30 09:00:31 -05:00 committed by sruthipsuresh
parent 898c0775c6
commit ec6ebe086f
1 changed files with 2 additions and 2 deletions
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software/bedtools/sloprefseq/test_main.nf
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@ -9,11 +9,11 @@ include BEDTOOLS_SLOPEREFSEQ from '../main.nf' params(params)
// Define input channels // Define input channels
ch_input_1 = Channel.fromPath('./tests/data/bed/A.bed') ch_input_1 = Channel.fromPath('./tests/data/bed/A.bed')
// ch_input_2 = Channel.fromPath('./tests/data/bed/B.bed') ch_input_2 = Channel.fromPath('./tests/data/bed/genome.sizes')
def additional_params_map = [:] def additional_params_map = [:]
// Run the workflow // Run the workflow
workflow { workflow {
BEDTOOLS_SLOPEREFSEQ(ch_input_1, additional_params_map) BEDTOOLS_SLOPEREFSEQ(ch_input_1, ch_input_2, additional_params_map)
} }