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Use a newer container version because the previous one is broken (#1933)

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Matthieu Muffato 2022-08-22 11:18:09 +01:00 committed by GitHub
parent 37c6d4a1a1
commit ed82766696
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1 changed files with 3 additions and 3 deletions
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modules/ncbigenomedownload/main.nf
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@ -2,10 +2,10 @@ process NCBIGENOMEDOWNLOAD {
tag "$meta.id" tag "$meta.id"
label 'process_low' label 'process_low'
conda (params.enable_conda ? "bioconda::ncbi-genome-download=0.3.0" : null) conda (params.enable_conda ? "bioconda::ncbi-genome-download=0.3.1" : null)
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/ncbi-genome-download:0.3.0--pyh864c0ab_1' : 'https://depot.galaxyproject.org/singularity/ncbi-genome-download:0.3.1--pyh5e36f6f_0' :
'quay.io/biocontainers/ncbi-genome-download:0.3.0--pyh864c0ab_1' }" 'quay.io/biocontainers/ncbi-genome-download:0.3.1--pyh5e36f6f_0' }"
input: input:
val meta val meta