diff --git a/.github/filters.yml b/.github/filters.yml
index 6d64aec6..188ba85c 100644
--- a/.github/filters.yml
+++ b/.github/filters.yml
@@ -162,8 +162,8 @@ stringtie:
   - tests/software/stringtie/**
 
 tool_subtool:
-  - software/tool/subtool/**
-  - tests/software/tool/subtool/**
+  - software/TOOL/SUBTOOL/**
+  - tests/software/TOOL/SUBTOOL/**
 
 trimgalore:
   - software/trimgalore/**