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Remove debugging statement

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This commit is contained in:
Phil Ewels 2020-07-17 16:00:08 +02:00
parent 2d1252c804
commit f01b3f13a6
1 changed files with 0 additions and 1 deletions
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software/fastqc/main.nf
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@ -26,7 +26,6 @@ process FASTQC {
if (single_end) { if (single_end) {
""" """
[ ! -f ${name}.fastq.gz ] && ln -s $reads ${name}.fastq.gz [ ! -f ${name}.fastq.gz ] && ln -s $reads ${name}.fastq.gz
ls -la
fastqc ${params.fastqc_args} --threads $task.cpus ${name}.fastq.gz fastqc ${params.fastqc_args} --threads $task.cpus ${name}.fastq.gz
fastqc --version | sed -n "s/.*\\(v.*\$\\)/\\1/p" > fastqc.version.txt fastqc --version | sed -n "s/.*\\(v.*\$\\)/\\1/p" > fastqc.version.txt
""" """