From ec23ebc7c5c2517d18128eac06306dcdcf701fdb Mon Sep 17 00:00:00 2001 From: "James A. Fellows Yates" Date: Sun, 17 Apr 2022 21:17:59 +0200 Subject: [PATCH 1/3] Update modules/motus/downloaddb/main.nf --- modules/motus/downloaddb/main.nf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/modules/motus/downloaddb/main.nf b/modules/motus/downloaddb/main.nf index e2a0cec6..8162c664 100644 --- a/modules/motus/downloaddb/main.nf +++ b/modules/motus/downloaddb/main.nf @@ -18,7 +18,7 @@ process MOTUS_DOWNLOADDB { script: def args = task.ext.args ?: '' - def software = ${motus_downloaddb.simpleName}_copy.py + def software = ${motus_downloaddb.simplename}_copy.py """ ## must copy script file to working directory, ## otherwise the reference_db will be download to bin folder From 87005786e07eb3265aa011e5c1c34146cd4d9c0d Mon Sep 17 00:00:00 2001 From: "James A. Fellows Yates" Date: Sun, 17 Apr 2022 21:18:55 +0200 Subject: [PATCH 2/3] Update modules/motus/downloaddb/main.nf --- modules/motus/downloaddb/main.nf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/modules/motus/downloaddb/main.nf b/modules/motus/downloaddb/main.nf index 8162c664..e2a0cec6 100644 --- a/modules/motus/downloaddb/main.nf +++ b/modules/motus/downloaddb/main.nf @@ -18,7 +18,7 @@ process MOTUS_DOWNLOADDB { script: def args = task.ext.args ?: '' - def software = ${motus_downloaddb.simplename}_copy.py + def software = ${motus_downloaddb.simpleName}_copy.py """ ## must copy script file to working directory, ## otherwise the reference_db will be download to bin folder From 24fb7c89aafa401b084e8022b8999efca15fae9d Mon Sep 17 00:00:00 2001 From: JIANHONG OU Date: Thu, 28 Apr 2022 08:14:30 -0400 Subject: [PATCH 3/3] Update modules/motus/downloaddb/main.nf Co-authored-by: Robert A. Petit III --- modules/motus/downloaddb/main.nf | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/modules/motus/downloaddb/main.nf b/modules/motus/downloaddb/main.nf index e2a0cec6..58f3cd03 100644 --- a/modules/motus/downloaddb/main.nf +++ b/modules/motus/downloaddb/main.nf @@ -18,7 +18,7 @@ process MOTUS_DOWNLOADDB { script: def args = task.ext.args ?: '' - def software = ${motus_downloaddb.simpleName}_copy.py + def software = "${motus_downloaddb.simpleName}_copy.py" """ ## must copy script file to working directory, ## otherwise the reference_db will be download to bin folder