diff --git a/.github/workflows/cutadapt.yml b/.github/workflows/cutadapt.yml new file mode 100644 index 00000000..c7e5d8b1 --- /dev/null +++ b/.github/workflows/cutadapt.yml @@ -0,0 +1,22 @@ +name: cutadapt +on: + push: {} + pull_request: + paths: tools/cutadapt/* + +jobs: + run_ci_test: + runs-on: ubuntu-latest + + steps: + # Check out the repository + - uses: actions/checkout@v1 + submodules: true + + - name: Install Nextflow + run: | + wget -qO- get.nextflow.io | bash + sudo mv nextflow /usr/local/bin/ + + # Test the module + - run: nextflow run ./tools/cutadapt/sort/test_paired/ -ansi-log false