diff --git a/tests/modules/faqcs/nextflow.config b/tests/modules/faqcs/nextflow.config index 8730f1c4..a75988d0 100644 --- a/tests/modules/faqcs/nextflow.config +++ b/tests/modules/faqcs/nextflow.config @@ -1,5 +1,6 @@ process { publishDir = { "${params.outdir}/${task.process.tokenize(':')[-1].tokenize('_')[0].toLowerCase()}" } + ext.args = {"--debug" } } diff --git a/tests/modules/faqcs/test.yml b/tests/modules/faqcs/test.yml index 47f973f3..ef50d30d 100644 --- a/tests/modules/faqcs/test.yml +++ b/tests/modules/faqcs/test.yml @@ -3,8 +3,20 @@ tags: - faqcs files: + - path: output/faqcs/qa.test.base_content.txt + md5sum: f992603f01ca430c03c8aae02eba2f5d + - path: output/faqcs/qa.test.for_qual_histogram.txt + md5sum: a3d462ab84151e982f99f85f52c21de3 + - path: output/faqcs/qa.test.length_count.txt + md5sum: 80915f09fbaf5884c32e95acab2d031c + - path: output/faqcs/test.base_content.txt + md5sum: f992603f01ca430c03c8aae02eba2f5d - path: output/faqcs/test.fastp.log md5sum: be79dc893f87de1f82faf749cdfb848c + - path: output/faqcs/test.for_qual_histogram.txt + md5sum: a3d462ab84151e982f99f85f52c21de3 + - path: output/faqcs/test.length_count.txt + md5sum: 80915f09fbaf5884c32e95acab2d031c - path: output/faqcs/test.stats.txt md5sum: ea20e93706b2e4c676004253baa3cec6 - path: output/faqcs/test.trimmed.fastq.gz @@ -18,8 +30,20 @@ tags: - faqcs files: + - path: output/faqcs/qa.test.base_content.txt + md5sum: 99aa9a775ccd8d6503f0cf80f775203c + - path: output/faqcs/qa.test.for_qual_histogram.txt + md5sum: 4f4b131be5425bdfa4b3237e44fa7d48 + - path: output/faqcs/qa.test.length_count.txt + md5sum: 420298983c762754d5b0ef32c9d5dad4 + - path: output/faqcs/test.base_content.txt + md5sum: 99aa9a775ccd8d6503f0cf80f775203c - path: output/faqcs/test.fastp.log md5sum: be79dc893f87de1f82faf749cdfb848c + - path: output/faqcs/test.for_qual_histogram.txt + md5sum: 4f4b131be5425bdfa4b3237e44fa7d48 + - path: output/faqcs/test.length_count.txt + md5sum: 420298983c762754d5b0ef32c9d5dad4 - path: output/faqcs/test.stats.txt md5sum: 9a693f8af94ab8c485519d9a523aa622 - path: output/faqcs/test_1.trimmed.fastq.gz