nf-core_modules

Author	SHA1	Message	Date
Phil Ewels	f207f6c870	Add repository_type to .nf-core.yml (#1252 )	2 years ago
James A. Fellows Yates	c485109d9b	Add module: bamaligncleaner (#676 ) * Specify more guidelines on input channels * Linting * Updates based on code review * Update README.md * Fix broken sentence * Add bamAlignCleaner module * Add container tags * Update modules/bamaligncleaner/main.nf	3 years ago
James A. Fellows Yates	6913da9d2d	module: MALT/BUILD (#645 ) * Specify more guidelines on input channels * Linting * Updates based on code review * Update README.md * Fix broken sentence * Start MALT-build * Start MALT build (missing meta files and outputs specS) * Local tests * Correct test map_type * Finished module, just waiting for UNZIP module to finalise tests * Correct tests in preparation for Unzip * Ouptut log file too * Update meta.yml * Rename log file * Rename log file * Remove debugging stuff * Add Unzip module * Linting update * Linting update * Fix input db * Fix db file in cmd * Update modules/malt/build/main.nf * Update modules/malt/build/main.nf * Update main.nf	3 years ago
Harshil Patel	c5235a983d	nf-core modules bump-versions for all modules (#630 ) * Add blacklist of modules that shouldn't be updated to .nf-core.yml * nf-core modules bump-versions for all modules * Remove TODO statements identified by linting * Fix md5sums for failing tests * Fix more tests	3 years ago