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9 commits

Author SHA1 Message Date
Ramprasad Neethiraj
513b5fcab9
update stub for svdb/merge (#2066) 
update stub

Co-authored-by: Annick Renevey <47788523+rannick@users.noreply.github.com>
 2022-09-15 14:20:09 +02:00
WackerO
6b011dd148
SVDB MERGE samtools version (#1913) 
* Started (again) to work on bgzipping SVDB_MERGE output

* Updated test yml

* SVDB_MERGE now bgzips output

* Fixed singularity, renamed tests in test.yml

* Added samtools version

Co-authored-by: Cloud User <centos@oskar-instance.novalocal>
 2022-07-20 12:42:40 +02:00
WackerO
8214b73700
SVDB_MERGE bgzip (#1910) 
* Started (again) to work on bgzipping SVDB_MERGE output

* Updated test yml

* SVDB_MERGE now bgzips output

* Fixed singularity, renamed tests in test.yml

Co-authored-by: Cloud User <centos@oskar-instance.novalocal>
 2022-07-20 10:54:06 +02:00
Ramprasad Neethiraj
313d76e005 update svdb version 2022-05-06 00:18:16 +02:00
Ramprasad Neethiraj
a973b68200
svdb update to 2.6.0 (#1465) 2022-03-30 14:50:27 +02:00
Ramprasad Neethiraj
cc671a5f3c
Update svdb/merge (#1449) 
* fix error

* fix input string
 2022-03-27 14:15:43 +02:00
Ramprasad Neethiraj
5297d27fbf
update svdb to version 2.5.2 (#1390) 
* update svdb version and tests

* update link
 2022-03-21 10:39:34 +01:00
Ramprasad Neethiraj
ee915a43e4
update svdb merge (#1274) 
* update svdb merge

* fix undefined variable error

* remove prio join in the script block

* fix error

* fix error again

* update tests and refactor
 2022-02-24 09:49:30 +01:00
Ramprasad Neethiraj
f44e6c74b4
Add svdb/merge (#1233) 
* nf-core create

* svdb merge module and test

* remove to-do from test.yml

* version

* update meta.yml

* add stub

* add when
 2022-02-04 15:29:44 +01:00