4 commits

Author	SHA1	Message	Date
Matthias De Smet	3930ba227b	merge snapaligner modes into one	2022-05-06 14:10:44 +02:00
Matthias De Smet	b59713e623	Tool/snap aligner single (#1510) ... * first commit * add tool * fix tests * fix indents * Update modules/snapaligner/single/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * fix comments * fix versions * prettier Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-04-12 11:20:35 +02:00
Matthias De Smet	09125979cc	Tool/snap aligner paired (#1509) ... * first commit * edit main.nf * edit tests * run prettier * fix test * indent script * Update modules/snapaligner/paired/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/snapaligner/paired/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * fix version nr * update meta * fix versions Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-04-12 11:02:10 +02:00
Matthias De Smet	f57f085912	new tool snap-aligner/index (#1506) ... * add snapaligner/index * output fixes * fix outputs * fix tests * update inputs * fix more bugs * fix linting * Update modules/snapaligner/index/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/snapaligner/index/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * fix comments * fix indents * fix escaping Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-04-08 14:41:08 +02:00