millironx/nf-core_modules
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84 commits 30 branches 0 tags 142 MiB
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22 commits

Author SHA1 Message Date
Chris Cheshire
1cbfd0d125 luslab-umitools | Changed sample file names 2020-06-18 16:14:26 +01:00
Chris Cheshire
ceb1a6ef1a luslab-umitools | Cleaned up sample file names 2020-06-18 15:44:27 +01:00
Chris Cheshire
9092ae8c01 luslab-umitools | Cleaned up docker files and removed groovy dependancy 2020-06-18 15:40:24 +01:00
Candice
6ecf54d73c luslab-umitools | Added SAM/BAM options and group/dedup options 2020-06-04 17:01:46 +02:00
Candice
c5e958cc4f luslab-umitools | Added Nextflow config file 2020-06-04 17:00:25 +02:00
Candice
064bd11ebf luslab-umitools | Added single-cell RNA-seq options and grouping option 2020-06-03 18:41:34 +02:00
Candice
1508596f14 luslab-umitools | Edited Dockerfile in umi_tools 2020-06-03 18:41:34 +02:00
Candice
07b485eeec luslab-umitools | Minor corrections to main.nf in umi_tools/dedup 2020-06-02 19:05:08 +02:00
Candice
08d26794b5 luslab-umitools | Created yml file for dedup in umi_tools 2020-06-02 19:02:18 +02:00
Candice
3aace7c0c2 luslab-umitools | Added sample_id options in dedup 2020-06-02 18:45:55 +02:00
Candice
6970d25b59 luslab-umitools | Added basic options to dedup tool in umi_tools 2020-06-02 17:23:54 +02:00
Candice
4656667374 luslab-umitools | Renamed params and changed relative paths 2020-06-01 16:41:47 +02:00
Candice
ff0265fda4 luslab-umitools | Added input folder in dedup/test 2020-06-01 16:21:29 +02:00
Candice
e46db6d31d luslab-umitools | Created conda environment for umi_tools 2020-06-01 16:14:13 +02:00
Candice
5f82d0a702 luslab-umitools | Customized Dockerfile for umi_tools 2020-06-01 16:13:30 +02:00
Candice
7cc1319801 luslab-umitools | Renamed dedup.nf to main.nf 2020-06-01 15:18:49 +02:00
Candice
e00b7bd91e luslab-umitools | Added parameter overriding function to umi_tools 2020-06-01 15:02:21 +02:00
Candice
549f81e4ea luslab-umitools | Created a Dockerfile for umi_tools module 2020-06-01 14:52:43 +02:00
Candice
bfdccfe1b9 luslab-umitools | Initialized test.nf 2020-06-01 14:40:50 +02:00
Candice
ab2d819df3 luslab-umitools | Renamed umi-tools.nf to dedup.nf 2020-06-01 14:40:50 +02:00
Candice
ff243acf63 luslab-umitools | Created umitool.nf file in the dedup folder 2020-06-01 14:40:50 +02:00
Candice
baa5805350 luslab-umitools | Created test.nf and test folder in umi_tools/dedup 2020-06-01 14:40:50 +02:00