Ramprasad Neethiraj
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a973b68200
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svdb update to 2.6.0 (#1465)
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2022-03-30 14:50:27 +02:00 |
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Ramprasad Neethiraj
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49b18b1639
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add stub to modules used in raredisease pipeline (#1206)
* add stub section
* add stub for bcftools norm
* add stub to more modules
* fix expansionhunter tests
* revert changes -picard
* Update stub to write version no.s to a file
* add picard
* revert picard again
* add stubs to more modules
* fix bwamem2
* add bcftools view
* add stubs
* fix svdb query
* review suggestions
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2022-03-28 17:48:39 +02:00 |
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Ramprasad Neethiraj
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cc671a5f3c
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Update svdb/merge (#1449)
* fix error
* fix input string
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2022-03-27 14:15:43 +02:00 |
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Ramprasad Neethiraj
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5297d27fbf
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update svdb to version 2.5.2 (#1390)
* update svdb version and tests
* update link
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2022-03-21 10:39:34 +01:00 |
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Ramprasad Neethiraj
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ee915a43e4
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update svdb merge (#1274)
* update svdb merge
* fix undefined variable error
* remove prio join in the script block
* fix error
* fix error again
* update tests and refactor
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2022-02-24 09:49:30 +01:00 |
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Matthias Hörtenhuber
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e745e167c1
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Fix formatting in yaml files, add yamllint config (#1279)
* fix yml formatting
* allow fastq.gz and fq.gz as file input, add meta.yml and test
* fix yaml files
* Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test"
This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4.
* prettier magic!
* fix comments for yamllint
* remove node version number
* fix linting errors
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
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2022-02-15 11:15:27 +00:00 |
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Ramprasad Neethiraj
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f44e6c74b4
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Add svdb/merge (#1233)
* nf-core create
* svdb merge module and test
* remove to-do from test.yml
* version
* update meta.yml
* add stub
* add when
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2022-02-04 15:29:44 +01:00 |
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Mahesh Binzer-Panchal
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e20e57f90b
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Add when: block (#1261)
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2022-02-04 09:53:32 +01:00 |
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Ramprasad Neethiraj
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fc4bd3a2d2
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Add svdb/query (#1249)
* first commit
* add test data
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2022-02-01 20:46:10 +01:00 |
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