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3 commits

Author SHA1 Message Date
Benjamin Wingfield
8e5eaf1fa4
Update plink2/vcf to output zstandard compressed data automatically (#1258) 
* update plink2/vcf to output zstandard compressed data automatically

* update meta

* set plink CPU and memory usage

Co-authored-by: Sateesh <33637490+sateeshperi@users.noreply.github.com>
 2022-03-01 19:43:28 -05:00
Matthias Hörtenhuber
e745e167c1
Fix formatting in yaml files, add yamllint config (#1279) 
* fix yml formatting

* allow fastq.gz and fq.gz as file input, add meta.yml and test

* fix yaml files

* Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test"

This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4.

* prettier magic!

* fix comments for yamllint

* remove node version number

* fix linting errors

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
 2022-02-15 11:15:27 +00:00
Benjamin Wingfield
b012b349c1
New module: plink2/vcf (#1006) 
* implement plink2 VCF import

* fix yaml indentation

Co-authored-by: Chris Cheshire <chris.j.cheshire@gmail.com>
 2021-11-15 13:55:18 +00:00