5 commits

Author	SHA1	Message	Date
JIANHONG OU	c8f2c44e22	Merge remote-tracking branch 'origin' into motus_profile	2022-05-05 09:41:13 -04:00
Matthias De Smet	c17d1a7a7b	fix output glob (#1552)	2022-04-22 13:04:41 +02:00
Matthias De Smet	b1749445d7	fix output glob (#1551)	2022-04-22 12:50:17 +02:00
Matthias De Smet	9e3daae8ef	New module: elprep filter (#1524) ... * first commit * syntax fix * fix input * output sam during test for md5sum * replace md5sum with contains * add new test data, add extra in/outputs * cli fixes * fix outputs * Update modules/elprep/filter/main.nf Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/elprep/filter/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * Update modules/elprep/filter/meta.yml Co-authored-by: James A. Fellows Yates <jfy133@gmail.com> * fix suggestions by @jfy133 * Bit more verbose explanation for bool vals * define variables * fix prettier Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-04-22 11:08:03 +02:00
Matthias De Smet	90b203d3e9	Tool/elprep split (#1533) ... * tool: elprep split * fixes for testing * fix tests * fix test outputs * create test-yaml * fix suggestions by @jfy133 Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>	2022-04-22 10:20:05 +02:00