millironx/nf-core_modules
1
0
Fork 0
mirror of https://github.com/MillironX/nf-core_modules.git synced 2024-12-26 12:28:17 +00:00
Code Issues Releases Packages Activity
1392 commits 30 branches 0 tags 142 MiB
Commit graph

4 commits

Author SHA1 Message Date
Harshil Patel
b3278a1e63
Modules TLC (#551) 
* Modules TLC

* Fix all the tests
 2021-07-01 16:13:01 +01:00
Jose Espinosa-Carrasco
95e02f913f
Update comments with new style (#497) 
* Update comment style on functions.nf files

* Update test main.nf comments

* Add meta for ggread
 2021-05-12 14:56:46 +01:00
Harshil Patel
dce27b8102
Update functions.nf to be more flexible for publishing by meta keys (#423) 
* Update functions.nf

* Replace saveAs line in module main script

* Add spacing for ECLint
 2021-04-09 17:23:56 +01:00
Nicholas Toda
53109d53c0
add gatk4/fastqtosam #198 (#311) 
* Inital nf-core create

* remove TODO comments, input and output files defined

* add get version in script

* added flow control for single/paired end data

* added script main commands

* removed completed TODO messages

* removed completed TODO messages

* added software info

* added input reads description

* added output description

* added description and keywords

* added single end test

* added paired end test

* fixed sample name flag

* fixed reverse read variable

* added test yaml

* update for pytest_software

* order in pytest_software was different

* replaced functions.nf with copy from another module

* simplify read command line

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

Co-authored-by: Nicholas TODA <nicholas.toda@mnhn.fr>
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
 2021-03-22 18:26:02 +00:00