Commit graph

9 commits

Author SHA1 Message Date
Jose Espinosa-Carrasco
572abb00b3
Remove def from module options definition in main (#270)
* Remove def from module options definition in main

* Fix bismark_deduplicate tests

* Fix bwameth_align tests

* Fixing gatk4 conda tests ("=" instead of ':' in build id)

* Same as previous commit (Fix gatk4 test)

* Fix qualimap bamqc test (no md5 check for pngs)

* Fix seqkit split2 tests. Changed to new test data

* Fix samtools tests. Some were missing initOptions include

* Removing TOOL SUBTOOL template module since now it is included on tools repo
2021-03-15 12:16:43 +00:00
drpatelh
dcc580e4fb Remove Conda build ids for all modules 2021-02-16 23:58:23 +00:00
drpatelh
423144808c seacr - add build info for mulled container 2021-02-03 11:05:10 +00:00
Chris Cheshire
6d34e6964f seacr | added new line at end 2021-01-05 10:20:13 +00:00
Chris Cheshire
37840b3855 seacr | updated trailing whitespace 2021-01-05 09:54:44 +00:00
Chris Cheshire
9c00d1722c seacr | PR review changes 2021-01-05 09:50:47 +00:00
Chris Cheshire
b24834dfce seacr | local testing implimented 2020-12-17 14:20:24 +00:00
Chris Cheshire
74e7b5385f seacr | Added main process structure 2020-12-17 13:54:48 +00:00
Chris Cheshire
3ff2b558e0 seacr | Added callpeak skeleton 2020-12-16 11:05:06 +00:00