2 commits

Author	SHA1	Message	Date
Jose Espinosa-Carrasco	572abb00b3	Remove def from module options definition in main (#270) ... * Remove def from module options definition in main * Fix bismark_deduplicate tests * Fix bwameth_align tests * Fixing gatk4 conda tests ("=" instead of ':' in build id) * Same as previous commit (Fix gatk4 test) * Fix qualimap bamqc test (no md5 check for pngs) * Fix seqkit split2 tests. Changed to new test data * Fix samtools tests. Some were missing initOptions include * Removing TOOL SUBTOOL template module since now it is included on tools repo	2021-03-15 12:16:43 +00:00
Maxime Garcia	05cbbbaded	Rename gatk/createsequencedictionary -> gatk4/createsequencedictionary (#260) ... * fix: update and sort filters * fix: rename gatk/createsequencedictionary -> gatk4/createsequencedictionary	2021-03-08 14:45:46 +01:00