4 commits

Author	SHA1	Message	Date
praveenraj2018	691feeafdc	GATK4 SplitNCigarReads: fasta_fai_dict tuple is now split into separate input channels (#1076) ... * fasta_fai_dict tuple is now split into separate input channels * fix: lint errors * fix: pytest errors * Update modules/gatk4/splitncigarreads/meta.yml * Update modules/gatk4/splitncigarreads/main.nf Co-authored-by: Maxime U. Garcia <maxime.garcia@scilifelab.se>	2021-11-16 15:09:30 +01:00
Maxime U. Garcia	3b600af50e	feat: update gatk4 from 4.2.0.0 to 4.2.3.0 (#1059) ... * feat: update gatk4 from 4.2.0.0 to 4.2.3.0 * update md5checksum * commit all files * actually checksum was good, but I suspect something fishy with the tests	2021-11-11 08:58:59 +01:00
Maxime U. Garcia	b3c4667732	fix: update to gatk4.2.0.0 (#575) ... * fix: update to gatk4.2.0.0 * fix: update md5sum	2021-07-16 11:26:28 +02:00
Harshil Patel	e937c7950a	Rename software/ directory to modules/ to re-organise module structure (#567) ... * Update README * Rename pytest_software.yml to pytest_modules.yml * Rename main software directory to modules * Remove deprecated modules * Rename tests software to modules * Replace paths for tests in pytest_modules.yml * Replace software with modules in Github Actions * Replace software with modules in main.nf tests * Rename software to modules in test.yml	2021-07-07 10:10:18 +01:00