Nicolas Vannieuwkerke
|
c517ce9b4d
|
Added the module and some simple testing
|
2022-05-04 13:42:12 +02:00 |
|
Mahesh Binzer-Panchal
|
8df20218bf
|
Add more tests and capture summaries
Co-authored-by: Jill V. Hagey, PhD <jvhagey@gmail.com>
|
2022-05-04 09:22:43 +00:00 |
|
Mahesh Binzer-Panchal
|
3bb0711b06
|
Merge branch 'master' into busco
|
2022-05-04 09:15:46 +02:00 |
|
Lauri Mesilaakso
|
530b5ac661
|
Merge branch 'master' into add_compression_to_bam2fq
|
2022-05-04 09:53:46 +03:00 |
|
Chris Cheshire
|
7949c1f048
|
Merge pull request #1607 from luslab/expected_error_fix
Bowtie2 - Added support for large indexes and improved error reporting
|
2022-05-03 22:27:45 +01:00 |
|
Chris Cheshire
|
79e64cdd1f
|
Merge branch 'master' into expected_error_fix
|
2022-05-03 22:21:28 +01:00 |
|
JIANHONG OU
|
dc59ad0bf5
|
fix the version issue.
|
2022-05-03 12:27:39 -04:00 |
|
jasmezz
|
480c4ced78
|
Update meta.yml
|
2022-05-03 17:35:16 +02:00 |
|
jasmezz
|
fa9f0753de
|
Apply review suggestions + add stub for prokka test workflow
|
2022-05-03 17:30:16 +02:00 |
|
Jill V. Hagey, PhD
|
f02cd618b8
|
Update meta.yml
|
2022-05-03 10:09:19 -04:00 |
|
Lauri Mesilaakso
|
12f79c2101
|
Merge branch 'master' into add_compression_to_bam2fq
|
2022-05-03 17:03:02 +03:00 |
|
Mahesh Binzer-Panchal
|
1c54c0b1ae
|
Apply suggestions from code review
Co-authored-by: Matthieu Muffato <cortexspam-github@yahoo.fr>
|
2022-05-03 16:02:11 +02:00 |
|
Matthieu Muffato
|
6351ec745e
|
Update contributor list
|
2022-05-03 14:56:27 +01:00 |
|
Matthieu Muffato
|
4be754b008
|
It's a file, not a directory
|
2022-05-03 14:53:17 +01:00 |
|
ljmesi
|
a39fa4e003
|
Fix checksum for one file
|
2022-05-03 15:47:49 +02:00 |
|
Mahesh Binzer-Panchal
|
636abad8f1
|
Merge branch 'master' into busco
|
2022-05-03 15:38:25 +02:00 |
|
nvnieuwk
|
1f906a7c6a
|
Merge pull request #1608 from nvnieuwk/vardict-java-update
Small update to vardict-java
|
2022-05-03 15:37:52 +02:00 |
|
Nicolas Vannieuwkerke
|
96d4a31cc1
|
Moved the BED file to the main tuple
|
2022-05-03 15:31:05 +02:00 |
|
Mahesh Binzer-Panchal
|
5f4781adaa
|
Merge branch 'master' into busco
|
2022-05-03 15:27:10 +02:00 |
|
Mahesh Binzer-Panchal
|
57db28386e
|
Support batch fasta analysis
|
2022-05-03 13:26:49 +00:00 |
|
ljmesi
|
034352dbbf
|
Merge branch 'add_compression_to_bam2fq' of https://github.com/Genomic-Medicine-Linkoping/modules into add_compression_to_bam2fq
|
2022-05-03 15:18:12 +02:00 |
|
ljmesi
|
5510ea39fe
|
Test --no-name to solve inconsistent checksums
|
2022-05-03 15:18:09 +02:00 |
|
Ramprasad Neethiraj
|
26311aba2a
|
fix minor errors
|
2022-05-03 15:04:37 +02:00 |
|
Ramprasad Neethiraj
|
be085c0173
|
Merge branch 'master' of https://github.com/nf-core/modules into feat/update_cnvpytor
|
2022-05-03 14:55:42 +02:00 |
|
Ramprasad Neethiraj
|
19cfb4e951
|
update meta files
|
2022-05-03 14:53:56 +02:00 |
|
Ramprasad Neethiraj
|
46e5752b82
|
update tests
|
2022-05-03 14:32:45 +02:00 |
|
Ramprasad Neethiraj
|
3efa931bf6
|
view
|
2022-05-03 14:26:46 +02:00 |
|
Ramprasad Neethiraj
|
829c15c98b
|
partition
|
2022-05-03 14:26:34 +02:00 |
|
Ramprasad Neethiraj
|
7cc47f6ba6
|
importrd
|
2022-05-03 14:25:20 +02:00 |
|
Ramprasad Neethiraj
|
07e026054a
|
histogram
|
2022-05-03 14:24:54 +02:00 |
|
Ramprasad Neethiraj
|
2990dc8357
|
callcnv module
|
2022-05-03 14:20:05 +02:00 |
|
Lauri Mesilaakso
|
a65e76e3dd
|
Merge branch 'master' into add_compression_to_bam2fq
|
2022-05-03 14:30:54 +03:00 |
|
Chris Cheshire
|
6f35537d40
|
Merge branch 'master' into expected_error_fix
|
2022-05-03 12:21:51 +01:00 |
|
Chris Cheshire
|
1baf143607
|
Merge pull request #1548 from rpetit3/rp3-add-shigatyper
add module for shigatyper
|
2022-05-03 12:21:43 +01:00 |
|
Chris Cheshire
|
829183ee84
|
Merge branch 'master' into rp3-add-shigatyper
|
2022-05-03 12:16:54 +01:00 |
|
Chris Cheshire
|
b3ee6384e6
|
Merge pull request #1604 from nf-core/add-slimfastq
feat: add module for slimfastq
|
2022-05-03 12:16:41 +01:00 |
|
Chris Cheshire
|
6015478b72
|
Merge branch 'master' into add-slimfastq
|
2022-05-03 12:11:19 +01:00 |
|
Chris Cheshire
|
d7fb969a74
|
Merge branch 'master' into rp3-add-shigatyper
|
2022-05-03 12:10:23 +01:00 |
|
Chris Cheshire
|
40e6bd9dc1
|
bowtie2|fix tags error
|
2022-05-03 12:07:04 +01:00 |
|
Chris Cheshire
|
0f1ee7e50d
|
bowtie2|test fixes
|
2022-05-03 12:04:51 +01:00 |
|
Chris Cheshire
|
61f68913fe
|
Merge branch 'master' into expected_error_fix
|
2022-05-03 11:49:35 +01:00 |
|
Chris Cheshire
|
768073be63
|
bowtie2|Added support for large indexes
|
2022-05-03 11:46:19 +01:00 |
|
Mahesh Binzer-Panchal
|
012f085378
|
Prettier
|
2022-05-03 09:19:39 +00:00 |
|
Mahesh Binzer-Panchal
|
9eff38ff94
|
Update meta.yml
|
2022-05-03 09:15:45 +00:00 |
|
Mahesh Binzer-Panchal
|
ddbe6e8f40
|
Merge branch 'master' into busco
|
2022-05-03 10:48:03 +02:00 |
|
Mahesh Binzer-Panchal
|
9a72548ee1
|
Update busco module
|
2022-05-03 08:42:56 +00:00 |
|
Lauri Mesilaakso
|
6367c6a1ad
|
Merge branch 'master' into add_compression_to_bam2fq
|
2022-05-03 11:41:25 +03:00 |
|
James A. Fellows Yates
|
b61cdc7355
|
Merge pull request #1570 from nvnieuwk/vardict-java
new_module:vardict-java
|
2022-05-03 10:26:41 +02:00 |
|
nvnieuwk
|
f85787b19e
|
Merge branch 'master' into vardict-java
|
2022-05-03 10:17:04 +02:00 |
|
nvnieuwk
|
8187641280
|
Update modules/vardictjava/meta.yml
Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
|
2022-05-03 10:16:45 +02:00 |
|