avantonder
710ab76b90
new module: gubbins ( #377 )
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* new gubbins module
* new gubbins module
* new gubbins module
* Update software/gubbins/main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* Update software/gubbins/main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* Update software/gubbins/main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* Update software/gubbins/meta.yml
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* new gubbins module
* new gubbins module
* new gubbins module
* new gubbins module
* new gubbins module
* new gubbins module
* new gubbins module
* Update tests/config/test_data.config
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* Update tests/software/gubbins/main.nf
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
* new gubbins module
* new gubbins module
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-04-07 16:31:24 +01:00
Robert A. Petit III
c9256616b9
update tests for new config ( #384 )
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* update tests for new config
* fix quast, update more
* more updates!
* more tests updated
* fix tests, added tabix gff3.gz
* Delete main.nf
Removing SPAdes from PR to avoid merge conflicts with https://github.com/nf-core/modules/pull/396
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-04-01 20:22:06 +01:00
Ravneet Bhuller
c5c59d44a1
PR for sequenzautils/bam2seqz ( #395 )
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* added files
* edited files
* removed file
* README.md edited
Co-authored-by: kaurravneet4123 <kaurravneet4123@yahoo.com@users.noreply.github.com>
2021-04-01 07:08:27 +02:00
Jose Espinosa-Carrasco
17fbdf96cb
Fix some module tests after switching to config data ( #386 )
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* Adding tar.gz kraken2 db to test data
* Update test path files for untar module
* Update test path files for kraken2/run module
* Update test path files for cat/fastq module
2021-03-24 18:28:07 +00:00
Harshil Patel
acb1a12a56
Re-organise all test data ( #354 )
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* Re-organise all test data
* Fix ECLint
* Fix ECLint agaaainn
* Now is not the time EClint
2021-03-24 09:53:41 +00:00
