Commit graph

4 commits

Author SHA1 Message Date
Harshil Patel
49da864287
Update versions key in meta.yml for all modules (#787) 2021-10-03 08:20:26 +01:00
Harshil Patel
7b3315591a
Remove def software lines and emit versions channel as plural (#780)
* Remove def software line

* Replace version with versions in emit statement

* Fix default software names
2021-10-01 14:04:56 +01:00
Gregor Sturm
906577873b
Bulk update modules to use versions.yml (#739)
* New functions.nf

* Convert code to create versions.yml

* Update meta.yml

* update output channel

* Fix more meta.yml

* Manually update remaining modules

* remove superflous echo

* Fix misformatted meta.yml files

* Fix yaml, was list instead of dict

* fix version for bcftools

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-09-27 09:41:24 +01:00
Abhinav Sharma
0d53a34eed
module fastani (#695)
* initiate agrvate module

* remove todos [ci skip]

* initiate fastani draft [ci skip]

* clean stubs [ci skip]

* interim commit [ci skip]

* accomodate the batch/per-sample processing [ci skip]

* use the meta map [ci skip]

* run first test [ci skip]

* remove extra spaces [ci skip]

* change output file name [ci skip]

* update the expected output [ci skip]

* update the files used for test [ci skip]

* fix typo [ci skip]

* test passing [ci skip]

* update the description

* remove extra files

* accomodate CR suggestions [ci skip]

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

* accomodate CR suggestions [ci skip]

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

* accomodate CR suggestions [ci skip]

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>

* use meta map for batch analysis

* fix the tests

* rely upon tuples

* Apply suggestions from code review

* Update main.nf

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
2021-09-21 20:20:26 +01:00