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3 commits

Author SHA1 Message Date
Harshil Patel
3c5492b4a3
Fix more version commands (#750) 
* Fix outstanding tests

* Fix more version commands

* Fix remaining modules
 2021-09-28 06:56:27 +01:00
Jose Espinosa-Carrasco
217303f5c1
Add option -p to set the # of cpus on stringtie (#601) 
* Add option -p  to set  the # of cpus on stringtie

* Bump version 2.1.7 to stringtie modules

* Output stringtie/merge version

* Fix padding

* Apply suggestions from code review

* Defining software variable

* Fix test, gff can't be md5 check, contains instead

Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
 2021-07-21 15:38:40 +02:00
Harshil Patel
e937c7950a
Rename software/ directory to modules/ to re-organise module structure (#567) 
* Update README

* Rename pytest_software.yml to pytest_modules.yml

* Rename main software directory to modules

* Remove deprecated modules

* Rename tests software to modules

* Replace paths for tests in pytest_modules.yml

* Replace software with modules in Github Actions

* Replace software with modules in main.nf tests

* Rename software to modules in test.yml
 2021-07-07 10:10:18 +01:00
Renamed from tests/software/stringtie/merge/test.yml (Browse further)