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4 commits

Author SHA1 Message Date
Jasmin F
e55012ff92
DeepBGC: tiny revisiosn (#2070)
* Fix variable prodigal_tf

* Remove tag in main.nf + tiny suggestions in ymls

Co-authored-by: louperelo <44900284+louperelo@users.noreply.github.com>
2022-09-15 22:57:33 +02:00
louperelo
d7d6b8222e
Deepbgc update versions.yml (#2058)
* not working yet (db not found)

* modify deeparg/download module to return db-path

* 🪄

* Prettier

* add test.yml

* much prettier

* test.yml delete md5 for pot. empty files

* adapt test.yml

* test.yml again

* Apply suggestions from code review

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* add deepbgc prodigal version to versions.yml

* Apply suggestions from code review

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-09-14 16:15:00 +02:00
louperelo
eae945721d
new module: deepbgc/pipeline (#2014)
* not working yet (db not found)

* modify deeparg/download module to return db-path

* 🪄

* Prettier

* add test.yml

* much prettier

* test.yml delete md5 for pot. empty files

* adapt test.yml

* test.yml again

* Apply suggestions from code review

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-09-07 14:59:01 +02:00
louperelo
04dfb65335
Deepbgcdownload (#2010)
* deepbgc_download first version

* with test.yml

* Apply suggestions from code review

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>

* Apply suggestions from code review

* delete trailing whitespace main.nf

Co-authored-by: James A. Fellows Yates <jfy133@gmail.com>
2022-09-05 16:51:21 +02:00