Commit graph

5 commits

Author SHA1 Message Date
James A. Fellows Yates
90aef30f43
Set process label to process_single for modules with no task.cpus usage (#2076)
* Set process label to `process_single` for modules with no `task.cpus` usage

* Fix tests of 'borked' modules

* prettier

* More modules are single-threaded and can use process_single

* Adding process_single to hmmer/esl* modules

* Fix failing tests

* Prettier

Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk>
Co-authored-by: Daniel Lundin <erik.rikard.daniel@gmail.com>
2022-09-19 11:54:47 +02:00
James A. Fellows Yates
ee0346b4d1
Update KRAKENTOOLS/COMBINEKREPORTS (#2043)
* Update main.nf

* Update meta.yml

* Re-add logos as not staged in a way that works with MultiQC config files

* Add meta to combinekreports
2022-09-13 14:31:27 +02:00
James A. Fellows Yates
fe3e18eaee
Add krakentools/combinekreports (#2018)
* Add krakentools_combinekreports

* Update test.yml

* Update main.nf

* Update tests/modules/krakentools/combinekreports/test.yml

* Prettier

* Update modules/krakentools/combinekreports/main.nf

Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>

Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>
2022-09-06 11:32:30 -06:00
Mahesh Binzer-Panchal
233fa70811
Update manual versioning (#1813) 2022-06-27 10:35:41 +02:00
8b2a473f58
New module: krakentools/kreport2krona (#1746)
* Add module definition for kreport2krona

* Add metadata for kreport2krona module

* Add tests for kreport2krona

Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>
2022-06-13 20:14:44 +02:00