2 commits

Author	SHA1	Message	Date
Matthias Hörtenhuber	e745e167c1	Fix formatting in yaml files, add yamllint config (#1279) ... * fix yml formatting * allow fastq.gz and fq.gz as file input, add meta.yml and test * fix yaml files * Revert "allow fastq.gz and fq.gz as file input, add meta.yml and test" This reverts commit 34002d7a7a8c7f7bb4600c3377f35c87849f71a4. * prettier magic! * fix comments for yamllint * remove node version number * fix linting errors Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>	2022-02-15 11:15:27 +00:00
Abhinav Sharma	15fd90ffe8	Add phyloflash module (#786) ... * initial stubs [ci skip] * remove comments and add main command [ci skip] * design iteration [ci skip] * add new standard functions.nf [ci skip] * update the version string [ci skip] * accomodate the db stubs and single/double ends [ci skip] * add FIXME for missing info [ci skip] * Accomodate the results folder [ci skip] * Update main.nf * Apply suggestions from code review * Update main.nf * Apply suggestions from code review * Add version file to stubs [ci skip] * Tweak the output dir pattern [ci skip] * Update modules/phyloflash/main.nf * Update modules/phyloflash/main.nf * Update modules/phyloflash/main.nf Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com> Co-authored-by: FriederikeHanssen <Friederike.hanssen@qbic.uni-tuebingen.de>	2021-11-21 19:43:58 +00:00