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3 commits

Author SHA1 Message Date
James A. Fellows Yates
90aef30f43
Set process label to process_single for modules with no task.cpus usage (#2076)
* Set process label to `process_single` for modules with no `task.cpus` usage

* Fix tests of 'borked' modules

* prettier

* More modules are single-threaded and can use process_single

* Adding process_single to hmmer/esl* modules

* Fix failing tests

* Prettier

Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk>
Co-authored-by: Daniel Lundin <erik.rikard.daniel@gmail.com>
2022-09-19 11:54:47 +02:00
louperelo
8002e373b5
Amrfinderplus: add db-version to versions.yml (#1899)
* not yet working: add db version to versions.yml

* next try: db version number not in versions.yml

* Fix amrfinderplus versioning

* Update main.nf

* Apply suggestions from code review

* Update main.nf

* Dump version for syncrony with run

* Update test.yml

* Apply suggestions from code review

Co-authored-by: James Fellows Yates <jfy133@gmail.com>
2022-07-19 09:52:36 +02:00
Robert A. Petit III
15d39f841a
add amrfinderplus module (#1284)
* add amrfinderplus module

* Update test.yml

* Update main.nf

* Update main.nf

* Update test.yml

* Update test.yml

* Update test.yml

* Update main.nf

* Update meta.yml

* Update meta.yml

* Update main.nf

* Update test.yml

* Update test.yml
2022-02-19 23:02:23 +00:00