7 commits

Author	SHA1	Message	Date
Kevin	3aacd46da2	Backfill software licenses meta (#876) ... * backfilled modules with meta.yml that had no license identifier * harmonized BSD license names * whitespace linting at modules/unzip/meta.yml:12 * harmonized software from US NIH-NCBI/NIST to 'US-Government-Work' * Update modules/bcftools/index/meta.yml `bcftools` is dual-licensed, use associative array to allow for multiple licenses Co-authored-by: Michael L Heuer <heuermh@acm.org> Co-authored-by: Michael L Heuer <heuermh@acm.org>	2021-10-22 15:39:54 -07:00
Harshil Patel	49da864287	Update versions key in meta.yml for all modules (#787)	2021-10-03 08:20:26 +01:00
Harshil Patel	7b3315591a	Remove def software lines and emit versions channel as plural (#780) ... * Remove def software line * Replace version with versions in emit statement * Fix default software names	2021-10-01 14:04:56 +01:00
Harshil Patel	9c31cf1566	Fix version commands: round 3 (#754) ... * Fix version commands: round 3 * Fix seqkit/split2 modules	2021-09-28 14:37:47 +01:00
Harshil Patel	43c2779258	Fix version commands (#749) ... * Fix version commands * Fix version commands: again	2021-09-27 22:10:37 +01:00
Gregor Sturm	906577873b	Bulk update modules to use versions.yml (#739) ... * New functions.nf * Convert code to create versions.yml * Update meta.yml * update output channel * Fix more meta.yml * Manually update remaining modules * remove superflous echo * Fix misformatted meta.yml files * Fix yaml, was list instead of dict * fix version for bcftools Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>	2021-09-27 09:41:24 +01:00
James A. Fellows Yates	8a2f01c416	module: bwa/samse (#626) ... * Specify more guidelines on input channels * Linting * Updates based on code review * Update README.md * Fix broken sentence * Add bwa/aln module * Also output reads as required with SAI * Add bwa samse * Fix container paths * remove TODO comment * Updated based on code from from @grst on bwa/sampe * Clarify output docs	2021-08-02 15:21:23 +02:00