3 commits

Author	SHA1	Message	Date
James A. Fellows Yates	90aef30f43	Set process label to process_single for modules with no task.cpus usage (#2076) ... * Set process label to `process_single` for modules with no `task.cpus` usage * Fix tests of 'borked' modules * prettier * More modules are single-threaded and can use process_single * Adding process_single to hmmer/esl* modules * Fix failing tests * Prettier Co-authored-by: Matthieu Muffato <mm49@sanger.ac.uk> Co-authored-by: Daniel Lundin <erik.rikard.daniel@gmail.com>	2022-09-19 11:54:47 +02:00
James A. Fellows Yates	ee0346b4d1	Update KRAKENTOOLS/COMBINEKREPORTS (#2043) ... * Update main.nf * Update meta.yml * Re-add logos as not staged in a way that works with MultiQC config files * Add meta to combinekreports	2022-09-13 14:31:27 +02:00
James A. Fellows Yates	fe3e18eaee	Add krakentools/combinekreports (#2018) ... * Add krakentools_combinekreports * Update test.yml * Update main.nf * Update tests/modules/krakentools/combinekreports/test.yml * Prettier * Update modules/krakentools/combinekreports/main.nf Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com> Co-authored-by: Robert A. Petit III <robbie.petit@gmail.com>	2022-09-06 11:32:30 -06:00