2 commits

Author	SHA1	Message	Date
James A. Fellows Yates	daab0a77dd	Add HAMRONIZATION/FARGENE and updates all HARMONIZATION tools to 1.1.1 (#2107) ... * Update main.nf * Update meta.yml * Re-add logos as not staged in a way that works with MultiQC config files * Update main.nf * Remove now unnecessary input channel * Remove unused channel from tests * Update hAMRonization to 1.1.1 and add hAMRonization farGene * Fix hamronizatio ntests * Prettier * Fix fargene linting * Correct file * Fix fargene output * Apply suggestions from code review Co-authored-by: Jasmin F <73216762+jasmezz@users.noreply.github.com> * Fix summarise tests * Prettier Co-authored-by: Jasmin F <73216762+jasmezz@users.noreply.github.com>	2022-09-27 15:32:18 +02:00
Jasmin F	7f7f6bc913	Add module hamronization/abricate (#1925) ... * Add hamronization/abricate * Update input pattern in meta.yml * Update location of hamronization test data * Apply suggestions from code review	2022-07-26 12:55:53 +02:00